top 3 
with you
when they come for me
waiting for the end
I love all the songs, but my definite favorite is Waiting for the End. Roads Untraveled is one I highly favor also.
All versions of Pushing me away
But there is no song I donāt love!
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QWERTY (Live Summer Sonic 2006)!!!
Even though I donāt like picking favorites of anything I can confidently say that Faint is my all time favorite song. Not just my favorite LP song but my favorite song from any band/artist.
Itās difficult to choose and I can think of no order of favoritism. But I think itās something like:
A Place For My Head
Points Of Authority
Castle Of Glass
From The Inside
In The End
Blackout
my favorite song changes every day. Now my favorite is Iāll be gone 
Leave out all the rest, Pushing me Away and With You.
HT: Crawling; In the End
Met: Faint; Figure 09
M2M: Leave out all the Rest; What Iāve Done
ATS: Iridescent; Blackout
LT: In my Remains; Burn it Down
ReAn: Enth E Nd; Frgt/10
Other: Itās going Down; High Voltage
Itās the most difficult Choice of my lifeā¦but, i like that:
New Divide
Across the Line
One Step Closer ( live version)
In The End
Numb -
Valentineās Day
In Pieces
ā¦
All musics.
Ps. ( Sorry for the bad english)
Pts. Of. Athrty, Lying From You, Step Up, What Iāve Done, The Little Things Give You Away, Waiting For The End and Iāll Be Gone 
Hybrid Theory - Papercut
Meteora - Breaking The Habit
Minutes to Midnight - Bleed It Out
A Thousand Suns - Blackout
Living Things - Lost In The Echo
Always a difficult question to answer.
It changes all the time for me, I guess it depends on the frame of mind that I am in.
Right now, I would say, Waiting for the End.
Roads Untraveled is also a favourite at the moment. It reminds me of someone special.
Thatās one of the toughest questions ever, so I will list my favorite per album.
-Hybrid Theory: With You followed closely by Runaway
-Meteora: Somewhere I Belong followed closely by Lying From You
-Minutes to Midnight: Little Things Give You Away followed closely by No More Sorrow
-A Thousand Suns: Waiting for the End followed closely by Iridescent
-Living Things: Iāll Be Gone followed closely by Lost in the Echo.
My favorite album would have to be Minutes to Midnight.
1 - Lost in the Echo
2 - Blackbirds
3 - Points of Authority/ 99 Problems/ One Step Closer
4 - In Pieces
5 - Numb
6 - In the End
7 - Hands Held High
8 - Powerless
9 - Waiting for the End
10 - Iridescent
All time favourite one step closer
Other than that I have my favourites on each album.
I have leave out all the rest lyrics tattooed on my back.
difficult question because I like pretty much all of them, but i would have to say my favorites would be In The End, Iāll Be Gone, Castle Of Glass, Faint, Numb and Given UP